Basic Information
Locus ID:
Tel1E01G689000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 520620742 | 520621275 | - | Tel1E01G689000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.72 | 18,721.03 Da | 46.56 | 90.62 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 103 | 165 | 3.23028E-20 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 102 | 164 | 1.1E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 25 | 86 | 3.3E-9 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 8 | 166 | 2.84E-40 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 98 | 170 | 1.0E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 13 | 97 | 8.8E-18 | - |
| SMART | SM00054 | efh_1 | 103 | 131 | 9.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 139 | 167 | 1.7E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 26 | 54 | 0.016 | IPR002048 |
| SMART | SM00054 | efh_1 | 62 | 90 | 0.89 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 99 | 134 | 14.931837 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 22 | 57 | 13.620752 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 58 | 93 | 10.133827 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 135 | 170 | 13.509171 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 35 | 47 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 71 | 83 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 112 | 124 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 148 | 160 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_044377884.1 | probable calcium-binding protein CML14 [Triticum aestivum] | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A452ZZU6 | Calmodulin OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology