Basic Information
Locus ID:
Tel1E01G678500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 516219992 | 516228801 | - | Tel1E01G678500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 152,634.55 Da | 62.20 | 67.29 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 1150 | 1185 | 0.025 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1237 | 1269 | 0.027 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 563 | 873 | 3.38E-14 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1064 | 1374 | 6.41E-49 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1037 | 1377 | 1.4E-124 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 581 | 865 | 1.9E-14 | - |
| SMART | SM00320 | WD40_4 | 1280 | 1319 | 87.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1188 | 1227 | 0.35 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1103 | 1142 | 0.062 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1336 | 1375 | 27.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1054 | 1092 | 5.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1231 | 1269 | 1.5E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1145 | 1185 | 2.3E-6 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1152 | 1194 | 11.043142 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1238 | 1271 | 11.978851 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1127 | 1151 | 8.770704 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1238 | 1271 | 9.99469 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1256 | 1270 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1129 | 1143 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1172 | 1186 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 1129 | 1143 | 1.0E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 1172 | 1186 | 1.0E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 1256 | 1270 | 1.0E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 482 | - | - |
| Coils | Coil | Coil | 900 | 927 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11110.1 | SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. | 0 |
| RefSeq | XP_037427440.1 | protein SUPPRESSOR OF PHYA-105 1-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9T014 | Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6A1C8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology