Basic Information
Locus ID:
Tel1E01G612100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Hemerythrin HHE cation binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 482544120 | 482557503 | + | Tel1E01G612100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 139,414.48 Da | 49.95 | 74.64 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 651 | 810 | 9.54123E-26 | - |
| CDD | cd12108 | Hr-like | 303 | 431 | 1.04829E-18 | - |
| CDD | cd12108 | Hr-like | 47 | 175 | 1.20711E-30 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 1120 | 1163 | 1.5841E-17 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 51 | 177 | 2.7E-13 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 300 | 432 | 1.1E-7 | IPR012312 |
| Pfam | PF14599 | Zinc-ribbon | 1168 | 1225 | 7.1E-23 | IPR039512 |
| Pfam | PF05495 | CHY zinc finger | 992 | 1067 | 5.0E-18 | IPR008913 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 649 | 810 | 1.6E-6 | IPR012312 |
| Pfam | PF13639 | Ring finger domain | 1120 | 1162 | 7.8E-7 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1119 | 1167 | 8.13E-8 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1058 | 1113 | 1.83E-15 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 983 | 1048 | 4.32E-9 | IPR037274 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1114 | 1165 | 5.6E-9 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 1191 | 1232 | 6.5E-17 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 42 | 195 | 3.0E-31 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 646 | 871 | 4.2E-24 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 302 | 449 | 1.1E-17 | - |
| SMART | SM00184 | ring_2 | 1121 | 1162 | 8.9E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1121 | 1163 | 11.087743 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 985 | 1054 | 25.602327 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1057 | 1120 | 30.178036 | IPR017921 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 880 | 904 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_037473294.1 | zinc finger protein BRUTUS-like [Triticum dicoccoides] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z4K1 | Zinc finger protein BRUTUS OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology