Basic Information
Locus ID:
Tel1E01G601500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 476435120 | 476438076 | + | Tel1E01G601500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 38,902.09 Da | 30.12 | 86.74 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 14 | 184 | 2.29037E-57 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 211 | 365 | 1.15637E-74 | - |
| Pfam | PF00190 | Cupin | 17 | 168 | 7.0E-23 | IPR006045 |
| Pfam | PF00190 | Cupin | 209 | 351 | 1.3E-20 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 10 | 357 | 8.78E-47 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 208 | 368 | 2.9E-48 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 18 | 190 | 7.0E-29 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 13 | 170 | 5.8E-29 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 208 | 352 | 9.3E-13 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 271 | 287 | 1.3E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 307 | 325 | 1.3E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 224 | 244 | 1.3E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 329 | 346 | 1.3E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 289 | 304 | 1.3E-12 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_044446044.1 | 12S seed storage globulin 1-like [Triticum aestivum] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6A1J5 | 11S seed storage protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology