Basic Information
Locus ID:
Tel1E01G587900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 470598465 | 470600486 | + | Tel1E01G587900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 57,748.51 Da | 61.73 | 106.80 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 24 | 57 | 5.9E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 194 | 414 | 2.08E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 62 | 2.49E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 58 | 4.1E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 19 | 69 | 10.000863 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49030.2 | FBD, F-box and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_037473175.1 | uncharacterized protein LOC119349250 [Triticum dicoccoides] | 0 |
| Q9SMU0 | Putative F-box/FBD/LRR-repeat protein At3g49030 OS=Arabidopsis thaliana OX=3702 GN=At3g49030 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B5Z2N5 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH05.354, AH09.721, CH09.786 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_4AG0319250, gene-QOZ80_4BG0356840 ... |
| Poaceae | Hordeum vulgare | 18 | HORVU.MOREX.r3.1HG0007520.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 19 | gene-QYE76_000820, gene-QYE76_007611, gene-QYE76_007688 ... |
| Poaceae | Oryza coarctata | 10 | Oco07G003640, Oco08G003820, Oco09G015490, Oco09G015500 ... |
| Poaceae | Oryza sativa | 9 | LOC_Os04g30750.1, LOC_Os04g30810.1, LOC_Os04g30830.1 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G459900, gene-BS78_09G218700 |
| Poaceae | Puccinellia tenuiflora | 10 | Pt_Chr0102687, Pt_Chr0203147, Pt_Chr0306206, Pt_Chr0503882 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr01G024090, Chr23G014350 |
| Poaceae | Thinopyrum elongatum | 11 | Tel1E01G079600, Tel1E01G411000, Tel1E01G411400 ... |
| Poaceae | Triticum dicoccoides | 16 | gene_TRIDC1AG052530, gene_TRIDC1BG013270 ... |
| Poaceae | Triticum aestivum | 43 | TraesCS1A02G362200.1, TraesCS1A02G362300.1 ... |