halophFGD

Basic Information

Locus ID: Tel1E01G541200

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Description: Glycerophosphoryl diester phosphodiesterase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	445916989	445920821	+	Tel1E01G541200

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.03	83,243.77 Da	44.12	89.33	-0.03

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd08604	GDPD_SHV3_repeat_2	371	670	1.59187E-148	-
Pfam	PF03009	Glycerophosphoryl diester phosphodiesterase family	376	666	6.9E-27	IPR030395
SUPERFAMILY	SSF51695	PLC-like phosphodiesterases	36	339	4.45E-35	IPR017946
SUPERFAMILY	SSF51695	PLC-like phosphodiesterases	370	670	4.97E-44	IPR017946
Gene3D	G3DSA:3.20.20.190	Phosphatidylinositol (PI) phosphodiesterase	369	671	2.0E-44	IPR017946
Gene3D	G3DSA:3.20.20.190	Phosphatidylinositol (PI) phosphodiesterase	35	340	2.7E-37	IPR017946
ProSiteProfiles	PS51704	GP-PDE domain profile.	37	341	25.510983	IPR030395
ProSiteProfiles	PS51704	GP-PDE domain profile.	371	671	32.648548	IPR030395

Gene Ontology

Biological Process:

GO:0006629 (lipid metabolic process)

Molecular Function:

GO:0008081 (phosphoric diester hydrolase activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G58170.1	SHV3-like 5.
RefSeq	XP_037423702.1	glycerophosphodiester phosphodiesterase GDPDL7-like [Triticum dicoccoides]
Swiss-Prot	Q9LVN0	Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana OX=3702 GN=GDPDL7 PE=2 SV=1
TrEMBL	A0A3B5Y5U4	glycerophosphodiester phosphodiesterase OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg20162, jg24582, jg38412, jg3968
Aizoaceae	Mesembryanthemum crystallinum	3	gene_7182, gene_7183, gene_8905
Amaranthaceae	Atriplex hortensis	2	Ah008991, Ah018897
Amaranthaceae	Beta vulgaris	3	BVRB_4g089710, BVRB_4g089720, BVRB_8g192510
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg18411, Sbi_jg18412, Sbi_jg25424, Sbi_jg36816 ... Sbi_jg36817, Sbi_jg9265
Amaranthaceae	Salicornia europaea	4	Seu_jg19327, Seu_jg2604, Seu_jg4729, Seu_jg4731
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00011111, GOSA_00017391, GOSA_00017392, GOSA_00017393
Amaranthaceae	Suaeda glauca	5	Sgl23498, Sgl28628, Sgl28629, Sgl41838, Sgl46638
Amaranthaceae	Chenopodium album	10	gene:ENSEOMG00000008792, gene:ENSEOMG00000010910 ... gene:ENSEOMG00000011018, gene:ENSEOMG00000028441, gene:ENSEOMG00000030652, gene:ENSEOMG00000032962, gene:ENSEOMG00000038408, gene:ENSEOMG00000041343, gene:ENSEOMG00000042039, gene:ENSEOMG00000044067
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.2BG0001770, CQ.Regalona.r1.4BG0025310 ... CQ.Regalona.r1.8AG0023490, CQ.Regalona.r1.8BG0018880
Anacardiaceae	Pistacia vera	4	pistato.v30153960, pistato.v30155660, pistato.v30266220 ... pistato.v30266260
Apiaceae	Apium graveolens	3	Ag2G00436, Ag3G00491, Ag6G02536
Arecaceae	Cocos nucifera	5	COCNU_01G007040, COCNU_01G010820, COCNU_01G012280 ... COCNU_11G007630, COCNU_11G010750
Arecaceae	Phoenix dactylifera	5	gene-LOC103702318, gene-LOC103713563, gene-LOC103714246 ... gene-LOC103719050, gene-LOC103722432
Asparagaceae	Asparagus officinalis	4	AsparagusV1_01.251.V1.1, AsparagusV1_05.1265.V1.1 ... AsparagusV1_05.3049.V1.1, AsparagusV1_05.3235.V1.1
Asteraceae	Flaveria trinervia	4	Ftri15G05747, Ftri16G33942, Ftri2G29718, Ftri4G31944
Brassicaceae	Arabidopsis thaliana	7	AT1G66970.2, AT1G66980.1, AT3G20520.1, AT4G26690.1 ... AT5G55480.1, AT5G58050.1, AT5G58170.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10012748m.g.v1.0, Thhalv10012762m.g.v1.0 ... Thhalv10018170m.g.v1.0, Thhalv10020151m.g.v1.0, Thhalv10024494m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp3g18520.v2.2, Sp5g21930.v2.2, Sp6g17360.v2.2 ... Sp7g24660.v2.2, SpUn0870_0010.v2.2
Brassicaceae	Brassica nigra	16	BniB01g043270.2N, BniB02g034150.2N, BniB02g037430.2N ... BniB02g082560.2N, BniB05g010710.2N, BniB05g037630.2N, BniB05g037700.2N, BniB05g062990.2N, BniB08g013440.2N, BniB08g015200.2N, BniB08g024300.2N, BniB08g035060.2N, BniB08g049980.2N, BniB08g050010.2N, BniB08g050590.2N, BniB08g050620.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq01G1400, Ceq01G1401, Ceq03G2532
Casuarinaceae	Casuarina glauca	5	Cgl01G1572, Cgl01G1573, Cgl01G1579, Cgl01G1580, Cgl03G2672
Cymodoceaceae	Cymodocea nodosa	7	gene.Cymno02g05680, gene.Cymno02g05690, gene.Cymno02g05700 ... gene.Cymno02g05710, gene.Cymno03g09360, gene.Cymno04g07810, gene.Cymno17g05020
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate01g18120, gene.Thate03g20930, gene.Thate07g08490
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-1466, nbisL1-mrna-9061
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG05.1959, evm.TU.LG07.207
Plantaginaceae	Plantago ovata	2	Pov_00000908, Pov_00035939
Plumbaginaceae	Limonium bicolor	3	Lb1G03382, Lb2G10920, Lb5G28127
Poaceae	Echinochloa crus-galli	15	AH01.4089, AH06.2401, AH07.2400, AH07.634, AH08.1994 ... BH06.2196, BH07.2217, BH07.760, BH08.2095, BH09.1442, CH01.1596, CH06.2415, CH07.2285, CH08.2272, CH09.1549
Poaceae	Eleusine coracana subsp. coracana	8	gene-QOZ80_2AG0104280, gene-QOZ80_2AG0135770 ... gene-QOZ80_2BG0157640, gene-QOZ80_2BG0191300, gene-QOZ80_4AG0313930, gene-QOZ80_4BG0345100, gene-QOZ80_6BG0470650, gene-QOZ80_8AG0636350
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0081620.1, HORVU.MOREX.r3.2HG0174760.1 ... HORVU.MOREX.r3.6HG0575670.1, HORVU.MOREX.r3.6HG0589780.1, HORVU.MOREX.r3.7HG0679100.1
Poaceae	Lolium multiflorum	5	gene-QYE76_016133, gene-QYE76_021171, gene-QYE76_023344 ... gene-QYE76_029936, gene-QYE76_044669
Poaceae	Oryza coarctata	9	Oco03G004460, Oco03G013950, Oco04G004450, Oco04G014340 ... Oco07G008330, Oco08G008230, Oco10G006000, Oco15G011480, Oco16G011090
Poaceae	Oryza sativa	5	LOC_Os02g09450.1, LOC_Os02g37590.1, LOC_Os04g39610.1 ... LOC_Os08g39350.1, LOC_Os12g27102.1
Poaceae	Paspalum vaginatum	5	gene-BS78_04G065900, gene-BS78_04G178700 ... gene-BS78_06G130900, gene-BS78_07G181800, gene-BS78_10G202100
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0102659, Pt_Chr0202239, Pt_Chr0204385, Pt_Chr0302388 ... Pt_Chr0403838, Pt_Chr0403884, Pt_Chr0503953
Poaceae	Sporobolus alterniflorus	9	Chr06G008760, Chr09G013060, Chr13G008880, Chr13G008890 ... Chr15G010310, Chr16G016800, Chr17G016160, Chr23G010850, Chr26G008880
Poaceae	Thinopyrum elongatum	5	Tel1E01G541200, Tel2E01G581500, Tel6E01G346800 ... Tel6E01G400200, Tel7E01G430500
Poaceae	Triticum dicoccoides	10	gene_TRIDC1AG052040, gene_TRIDC1BG059510 ... gene_TRIDC2AG048610, gene_TRIDC2BG051080, gene_TRIDC6AG025050, gene_TRIDC6AG030590, gene_TRIDC6BG031030, gene_TRIDC6BG037850, gene_TRIDC7AG031200, gene_TRIDC7BG023400
Poaceae	Triticum aestivum	15	TraesCS1A02G353200.1, TraesCS1B02G368600.1 ... TraesCS1D02G357000.1, TraesCS2A02G330200.1, TraesCS2B02G352000.1, TraesCS2D02G332500.1, TraesCS6A02G174100.1, TraesCS6A02G200600.1, TraesCS6B02G202700.1, TraesCS6B02G226700.2, TraesCS6D02G163200.1, TraesCS6D02G189300.1, TraesCS7A02G243900.3, TraesCS7B02G147500.1, TraesCS7D02G242500.1
Poaceae	Zea mays	8	Zm00001eb034650_P001, Zm00001eb183390_P001 ... Zm00001eb199730_P001, Zm00001eb206420_P001, Zm00001eb234640_P001, Zm00001eb245640_P002, Zm00001eb327550_P001, Zm00001eb424720_P001
Poaceae	Zoysia japonica	5	nbis-gene-18673, nbis-gene-29793, nbis-gene-33552 ... nbis-gene-44144, nbis-gene-7424
Poaceae	Zoysia macrostachya	6	Zma_g12336, Zma_g13786, Zma_g15084, Zma_g16584, Zma_g21448 ... Zma_g23212
Portulacaceae	Portulaca oleracea	5	evm.TU.LG01.10, evm.TU.LG02.548, evm.TU.LG09.2124 ... evm.TU.LG18.1088, evm.TU.LG20.783
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g17140, gene.Posoc02g22990, gene.Posoc02g23060
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_10_RagTag.137, evm.TU.Scaffold_4_RagTag.2198 ... evm.TU.Scaffold_7_RagTag.118, evm.TU.Scaffold_8_RagTag.1609
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-13925, nbisL1-mrna-19615, nbisL1-mrna-19617 ... nbisL1-mrna-8727
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-13184, nbisL1-mrna-21273, nbisL1-mrna-407 ... nbisL1-mrna-4697
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-15083, nbisL1-mrna-16573, nbisL1-mrna-22302 ... nbisL1-mrna-4949
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000018l.54, evm.TU.utg000028l.68 ... evm.TU.utg000033l.85
Rhizophoraceae	Kandelia obovata	4	Maker00001477, Maker00003575, Maker00010468, Maker00015069
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-16685, nbisL1-mrna-17477, nbisL1-mrna-8032 ... nbisL1-mrna-9397
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-14529, nbisL1-mrna-22632, nbisL1-mrna-22666 ... nbisL1-mrna-9195
Salicaceae	Populus euphratica	6	populus_peu05620, populus_peu12254, populus_peu12255 ... populus_peu26628, populus_peu26629, populus_peu28344
Solanaceae	Lycium barbarum	4	gene-LOC132616891, gene-LOC132623903, gene-LOC132636311 ... gene-LOC132638541
Solanaceae	Solanum chilense	3	SOLCI001063200, SOLCI006781900, SOLCI007178300
Solanaceae	Solanum pennellii	4	gene-LOC107005499, gene-LOC107010467, gene-LOC107010530 ... gene-LOC107025846
Tamaricaceae	Reaumuria soongarica	3	gene_13102, gene_17857, gene_8133
Tamaricaceae	Tamarix chinensis	2	TC05G2666, TC06G0433
Zosteraceae	Zostera marina	5	Zosma01g03940.v3.1, Zosma01g34400.v3.1, Zosma01g39610.v3.1 ... Zosma02g23170.v3.1, Zosma05g21150.v3.1