Basic Information
Locus ID:
Tel1E01G468100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
UPL4
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 403258209 | 403266287 | - | Tel1E01G468100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 165,971.19 Da | 46.46 | 87.14 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1123 | 1514 | 7.88827E-98 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1169 | 1516 | 7.2E-78 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1119 | 1509 | 5.89E-92 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 116 | 531 | 9.6E-31 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 111 | 536 | 6.4E-42 | IPR011989 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1069 | 1289 | 1.7E-39 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1398 | 1514 | 1.5E-31 | - |
| SMART | SM00119 | hect_3 | 1133 | 1516 | 3.0E-87 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1144 | 1516 | 60.892563 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 839 | 880 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 808 | 824 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 808 | 880 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_044450752.1 | E3 ubiquitin-protein ligase UPL4-like [Triticum aestivum] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B5ZYP8 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology