Basic Information
Locus ID:
Tel1E01G410600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 363176874 | 363181072 | - | Tel1E01G410600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 28,531.29 Da | 52.40 | 85.68 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16789 | mRING-HC-C3HC5_MGRN1_like---blasttree | 201 | 241 | 5.38126E-27 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 200 | 246 | 2.4E-16 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 201 | 247 | 4.8E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 185 | 251 | 4.7E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 202 | 240 | 0.002 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 202 | 241 | 11.279532 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06140.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037469935.1 | probable E3 ubiquitin-protein ligase LUL4 [Triticum dicoccoides] | 0 |
| Q8LA32 | Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana OX=3702 GN=LUL4 PE=2 SV=1 | 0 | |
| TrEMBL | M8CZC7 | RING-type E3 ubiquitin transferase OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology