Basic Information
Locus ID:
Tel1E01G393600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Protein of unknown function (DUF1644)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 350606326 | 350609580 | + | Tel1E01G393600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 38,030.62 Da | 70.42 | 57.72 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07800 | Protein of unknown function (DUF1644) | 31 | 163 | 4.9E-35 | IPR012866 |
| ProSiteProfiles | PS50157 | Zinc finger C2H2 type domain profile. | 109 | 138 | 8.538013 | IPR013087 |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. | 110 | 133 | - | IPR013087 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 222 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24740.1 | Protein of unknown function (DUF1644). | 0 |
| RefSeq | XP_044333103.1 | uncharacterized protein LOC123053654 isoform X1 [Triticum aestivum] | 0 |
| TrEMBL | A0A3B5Y0T0 | C2H2-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_7AG0564570 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0059750.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_040973, gene-QYE76_040980 |
| Poaceae | Oryza coarctata | 2 | Oco13G005680, Oco14G006410 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g23790.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G085900, gene-BS78_08G010500 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G005700, Chr28G005790 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G393600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG035380, gene_TRIDC1BG040860 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G235500.1.cds1, TraesCS1B02G248200.3.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb305950_P004 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-1298 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g6318, Zma_g6319 |