Basic Information
Locus ID:
Tel1E01G373000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
FAD7
Description:
Domain of unknown function (DUF3474)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 332774567 | 332775423 | - | Tel1E01G373000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 17,260.51 Da | 33.19 | 86.36 | 0.18 |
Protein Domain:
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G11170.1 | fatty acid desaturase 7. Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid. | 0 |
| RefSeq | XP_037475605.1 | omega-3 fatty acid desaturase, chloroplastic-like [Triticum dicoccoides] | 0 |
| P48621 | Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max OX=3847 GN=FAD7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6ARM9 | Omega-3 fatty acid desaturase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg3253 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg21601 |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30022530, pistato.v30248550, pistato.v30266150 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0243780.1 |
| Poaceae | Oryza coarctata | 1 | Oco03G020330 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G012270 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G373000 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-19558, nbis-gene-3627, nbis-gene-57387 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_13_RagTag.937 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-25123, nbisL1-mrna-30082 |