Basic Information
Locus ID:
Tel1E01G357600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 318877895 | 318881480 | + | Tel1E01G357600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 87,333.62 Da | 57.31 | 82.58 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 712 | 753 | 5.78231E-23 | - |
| CDD | cd01989 | STK_N | 49 | 208 | 6.616E-32 | - |
| Pfam | PF00069 | Protein kinase domain | 451 | 637 | 6.0E-27 | IPR000719 |
| Pfam | PF04564 | U-box domain | 709 | 780 | 5.6E-18 | IPR003613 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 424 | 684 | 6.7E-51 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 64 | 174 | 7.79E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 703 | 782 | 2.47E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 508 | 704 | 6.8E-36 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 707 | 783 | 6.3E-27 | IPR013083 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 44 | 175 | 1.2E-8 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 423 | 507 | 5.0E-20 | - |
| SMART | SM00504 | Ubox_2 | 711 | 774 | 5.7E-27 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 442 | 690 | 24.951469 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 707 | 781 | 32.014355 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| Coils | Coil | Coil | 122 | 142 | - | - |
| Coils | Coil | Coil | 353 | 415 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_044442559.1 | U-box domain-containing protein 33-like [Triticum aestivum] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B5ZUB0 | E3 ubiquitin ligase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology