Basic Information
Locus ID:
Tel1E01G337200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 299563224 | 299564088 | + | Tel1E01G337200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.30 | 21,052.71 Da | 50.25 | 75.42 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 121 | 183 | 8.52829E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 119 | 182 | 7.5E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 44 | 106 | 3.7E-15 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 28 | 183 | 2.56E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 13 | 109 | 1.6E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 110 | 188 | 1.2E-22 | - |
| SMART | SM00054 | efh_1 | 157 | 185 | 7.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 121 | 149 | 1.6E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 81 | 109 | 0.067 | IPR002048 |
| SMART | SM00054 | efh_1 | 45 | 73 | 2.3E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 153 | 188 | 12.030714 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 41 | 76 | 14.5413 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 117 | 152 | 14.736568 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 77 | 112 | 10.580154 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 166 | 178 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 54 | 66 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 130 | 142 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 90 | 102 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 39 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32250.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_037465524.1 | probable calcium-binding protein CML11 [Triticum dicoccoides] | 0 |
| Q9AWK2 | Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5YX71 | Calcium-binding protein CML11 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology