Basic Information
Locus ID:
Tel1E01G336100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 297276904 | 297279363 | + | Tel1E01G336100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 75,654.73 Da | 57.05 | 66.21 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 513 | 589 | 5.79702E-45 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 49 | 228 | 2.2E-48 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 520 | 565 | 1.5E-10 | IPR011598 |
| SUPERFAMILY | SSF81995 | beta-sandwich domain of Sec23/24 | 282 | 405 | 5.75E-6 | - |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 519 | 590 | 6.41E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 508 | 593 | 1.5E-17 | IPR036638 |
| SMART | SM00353 | finulus | 522 | 571 | 9.5E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 516 | 565 | 17.389959 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 349 | - | - |
| Coils | Coil | Coil | 562 | 589 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_037410293.1 | transcription factor MYC2-like [Triticum dicoccoides] | 0 |
| Q336P5 | Transcription factor MYC2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | F2D1Q9 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology