Basic Information
Locus ID:
Tel1E01G324900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Ankyrin repeats (many copies)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 286116320 | 286120594 | - | Tel1E01G324900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 55,351.42 Da | 47.44 | 83.35 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13637 | Ankyrin repeats (many copies) | 188 | 249 | 3.5E-9 | - |
| Pfam | PF00023 | Ankyrin repeat | 112 | 132 | 0.012 | IPR002110 |
| Pfam | PF13637 | Ankyrin repeats (many copies) | 46 | 98 | 3.9E-16 | - |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 15 | 281 | 8.34E-50 | IPR036770 |
| SUPERFAMILY | SSF57850 | RING/U-box | 322 | 383 | 4.08E-9 | - |
| Gene3D | G3DSA:1.25.40.20 | - | 4 | 149 | 3.4E-33 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 153 | 278 | 6.1E-22 | IPR036770 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 310 | 393 | 9.2E-9 | IPR013083 |
| SMART | SM00248 | ANK_2a | 228 | 260 | 0.0013 | IPR002110 |
| SMART | SM00248 | ANK_2a | 44 | 73 | 3.5E-6 | IPR002110 |
| SMART | SM00184 | ring_2 | 327 | 376 | 3.4E-4 | IPR001841 |
| SMART | SM00248 | ANK_2a | 77 | 106 | 0.0016 | IPR002110 |
| SMART | SM00248 | ANK_2a | 185 | 214 | 7.8E-6 | IPR002110 |
| SMART | SM00248 | ANK_2a | 111 | 143 | 22.0 | IPR002110 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 327 | 377 | 10.202563 | IPR001841 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 44 | 76 | 15.0399 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 228 | 254 | 10.869141 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 185 | 214 | 12.195709 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 77 | 109 | 8.81647 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 228 | 254 | 10.89985 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 185 | 217 | 12.87639 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 111 | 132 | 9.118069 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 111 | 132 | 9.13699 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 44 | 75 | 13.920248 | - |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 342 | 351 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 480 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 493 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07270.1 | XB3 ortholog 3 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_037410014.1 | probable E3 ubiquitin-protein ligase XBOS33 [Triticum dicoccoides] | 0 |
| Q337A0 | Probable E3 ubiquitin-protein ligase XBOS33 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS33 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5ZTF7 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology