Basic Information
Locus ID:
Tel1E01G318400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Variant SH3 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 279138724 | 279142745 | + | Tel1E01G318400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 41,313.50 Da | 40.76 | 78.56 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 307 | 355 | 1.3E-10 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 44 | 255 | 4.54E-24 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 300 | 360 | 1.31E-16 | IPR036028 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 302 | 357 | 1.4E-16 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 42 | 264 | 3.6E-11 | IPR027267 |
| SMART | SM00326 | SH3_2 | 303 | 358 | 2.2E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 300 | 359 | 20.435379 | IPR001452 |
| Coils | Coil | Coil | 241 | 261 | - | - |
| Coils | Coil | Coil | 183 | 210 | - | - |
| Coils | Coil | Coil | 146 | 173 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_037464757.1 | SH3 domain-containing protein 2-like isoform X1 [Triticum dicoccoides] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YY05 | SH3 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology