HalophFGD

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Basic Information
Locus ID: Tel1E01G190200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Ring finger domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 117383631 117384023 + Tel1E01G190200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.39 13,914.63 Da 57.62 90.54 -0.24
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044439776.1 uncharacterized protein LOC123166076 [Triticum aestivum] 0
TrEMBL M8C0M3 Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 8 AH04.1456, AH08.464, BH04.1474, BH08.480, BH08.481, CH08.572 ...
CH04.1684, CH08.573
Poaceae Eleusine coracana subsp. coracana 10 gene-QOZ80_2AG0125180, gene-QOZ80_2BG0180820 ...
gene-QOZ80_8AG0619120, gene-QOZ80_8AG0619130, gene-QOZ80_8AG0619160, gene-QOZ80_8AG0619170, gene-QOZ80_8BG0646590, gene-QOZ80_8BG0646630, gene-QOZ80_8BG0646640, gene-QOZ80_9AG0687120
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.1HG0067400.1.CDS1 ...
HORVU.MOREX.r3.1HG0067600.1.CDS1, HORVU.MOREX.r3.7HG0731260.1.CDS1, HORVU.MOREX.r3.7HG0731270.1.CDS1, HORVU.MOREX.r3.7HG0731360.1.CDS1
Poaceae Lolium multiflorum 7 gene-QYE76_005497, gene-QYE76_014721, gene-QYE76_031759 ...
gene-QYE76_031761, gene-QYE76_031763, gene-QYE76_035646, gene-QYE76_035648
Poaceae Oryza coarctata 3 Oco11G015600, Oco12G015940, Oco12G015950
Poaceae Oryza sativa 2 LOC_Os06g47270.1, LOC_Os06g47280.1
Poaceae Paspalum vaginatum 6 gene-BS78_07G062100, gene-BS78_07G062300, gene-BS78_K238200 ...
gene-BS78_K238400, gene-BS78_K238500, gene-BS78_K238600
Poaceae Puccinellia tenuiflora 1 Pt_Chr0405128
Poaceae Sporobolus alterniflorus 4 Chr07G016900, Chr29G010780, Chr31G005920, Chr31G005950
Poaceae Thinopyrum elongatum 4 Tel1E01G190200, Tel1E01G521800, Tel1E01G525700 ...
Tel5E01G470200
Poaceae Triticum dicoccoides 1 gene_TRIDC7BG055000
Poaceae Triticum aestivum 11 TraesCS1A02G321800.1.cds1, TraesCS1A02G322000.1.cds1 ...
TraesCS1B02G334400.1.cds1, TraesCS1D02G101400.1.cds1, TraesCS1D02G322200.1.cds1, TraesCS5B02G293300.1.cds1, TraesCS7A02G444400.1, TraesCS7B02G343400.1.cds1, TraesCS7B02G343500.1.cds1, TraesCS7D02G433200.1.cds1, TraesCS7D02G433400.1.cds1
Poaceae Zea mays 1 Zm00001eb414770_P001
Poaceae Zoysia japonica 3 nbis-gene-39674, nbis-gene-48505, nbis-gene-48506
Poaceae Zoysia macrostachya 3 Zma_g23701, Zma_g23702, Zma_g912
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.