Basic Information
Locus ID:
Tel1E01G171400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Glycosyl hydrolases family 38 C-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 104180440 | 104192967 | - | Tel1E01G171400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 111,146.29 Da | 32.18 | 81.24 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 36 | 312 | 2.73338E-174 | - |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 890 | 995 | 2.8E-9 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 37 | 348 | 1.3E-92 | IPR000602 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 353 | 441 | 2.3E-16 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 595 | 808 | 4.5E-50 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 451 | 997 | 6.28E-144 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 25 | 349 | 6.23E-109 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 352 | 443 | 5.56E-25 | IPR028995 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 317 | 392 | 6.1E-30 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 590 | 856 | 2.1E-102 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 36 | 316 | 1.8E-118 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 393 | 448 | 7.7E-19 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1180 | - | 457 | 568 | 9.6E-25 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1360 | - | 877 | 998 | 1.1E-33 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 353 | 423 | 4.8E-18 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_044388141.1 | alpha-mannosidase-like isoform X2 [Triticum aestivum] | 0 |
| C0HJB3 | Alpha-mannosidase OS=Canavalia ensiformis OX=3823 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YUC4 | Alpha-mannosidase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology