HalophFGD

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Basic Information
Locus ID: Tel1E01G132800
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 74656547 74662863 - Tel1E01G132800
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.12 66,617.43 Da 57.59 91.92 -0.39
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08387 FBD 503 544 9.9E-6 IPR006566
SUPERFAMILY SSF81383 F-box domain 6 51 5.76E-8 IPR036047
SUPERFAMILY SSF52047 RNI-like 193 453 4.71E-7 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 182 461 3.1E-6 IPR032675
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G12840.1 0
RefSeq XP_051208529.1 uncharacterized protein LOC127325746 [Lolium perenne] 0
TrEMBL M8BN89 Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.3AG0024140
Poaceae Echinochloa crus-galli 12 AH04.2072, BH04.2135, BH04.2138, BH04.2139, BH04.2145 ...
CH02.2882, CH02.2897, CH04.2464, CH04.2731, CH05.2892, CH09.2705, CH09.2710
Poaceae Eleusine coracana subsp. coracana 15 gene-QOZ80_5AG0376310, gene-QOZ80_5BG0423530 ...
gene-QOZ80_9AG0671040, gene-QOZ80_9AG0690870, gene-QOZ80_9AG0690880, gene-QOZ80_9AG0690890, gene-QOZ80_9AG0690920, gene-QOZ80_9AG0690960, gene-QOZ80_9AG0691020, gene-QOZ80_9BG0715300, gene-QOZ80_9BG0717160, gene-QOZ80_9BG0717180, gene-QOZ80_9BG0717190, gene-QOZ80_9BG0717200, gene-QOZ80_9BG0717310
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.2HG0110910.1 ...
HORVU.MOREX.r3.3HG0313920.1.CDS1, HORVU.MOREX.r3.3HG0313940.1.CDS1, HORVU.MOREX.r3.3HG0313960.1.CDS1, HORVU.MOREX.r3.3HG0313970.1.CDS1
Poaceae Lolium multiflorum 32 gene-QYE76_007082, gene-QYE76_009132, gene-QYE76_009145 ...
gene-QYE76_028966, gene-QYE76_036423, gene-QYE76_036427, gene-QYE76_036428, gene-QYE76_036429, gene-QYE76_036430, gene-QYE76_038430, gene-QYE76_038432, gene-QYE76_038433, gene-QYE76_038601, gene-QYE76_038605, gene-QYE76_039894, gene-QYE76_039897, gene-QYE76_048047, gene-QYE76_049316, gene-QYE76_057696, gene-QYE76_057708, gene-QYE76_058077, gene-QYE76_058373, gene-QYE76_058394, gene-QYE76_059048, gene-QYE76_059050, gene-QYE76_060122, gene-QYE76_060933, gene-QYE76_065809, gene-QYE76_065814, gene-QYE76_065817, gene-QYE76_065822, gene-QYE76_065997
Poaceae Oryza coarctata 4 Oco07G001790, Oco07G002090, Oco21G006700, Oco22G010260
Poaceae Oryza sativa 13 LOC_Os02g28600.1, LOC_Os04g16160.1, LOC_Os05g46590.1 ...
LOC_Os08g24190.1, LOC_Os10g27400.1, LOC_Os11g33190.1, LOC_Os11g33220.1, LOC_Os11g33250.1, LOC_Os11g42230.1, LOC_Os11g42240.1, LOC_Os11g42270.1, LOC_Os11g42280.1, LOC_Os11g42300.1
Poaceae Paspalum vaginatum 7 gene-BS78_05G225600, gene-BS78_05G225700 ...
gene-BS78_05G225900, gene-BS78_09G116100, gene-BS78_09G116300, gene-BS78_10G066500, gene-BS78_10G066600
Poaceae Puccinellia tenuiflora 25 Pt_Chr0103367, Pt_Chr0103372, Pt_Chr0201689, Pt_Chr0201691 ...
Pt_Chr0201692, Pt_Chr0201698, Pt_Chr0305502, Pt_Chr0404387, Pt_Chr0500107, Pt_Chr0500134, Pt_Chr0500208, Pt_Chr0601131, Pt_Chr0601132, Pt_Chr0601137, Pt_Chr0601140, Pt_Chr0601141, Pt_Chr0601142, Pt_Chr0601144, Pt_Chr0601145, Pt_Chr0601146, Pt_Chr0601147, Pt_Chr0700042, Pt_Chr0700227, Pt_Chr0700413, Pt_Chr0700416
Poaceae Sporobolus alterniflorus 1 Chr16G004490
Poaceae Thinopyrum elongatum 4 Tel1E01G132800, Tel2E01G165500, Tel3E01G720600 ...
Tel3E01G721500
Poaceae Triticum dicoccoides 5 gene_TRIDC3AG058470, gene_TRIDC3BG072530 ...
gene_TRIDC3BG072570, gene_TRIDC3BG072620, gene_TRIDC7BG014460
Poaceae Triticum aestivum 20 TraesCS1D02G064600.1.cds1, TraesCS1D02G064900.1 ...
TraesCS2B02G089900.1.cds1, TraesCS2D02G073300.1.cds1, TraesCS3A02G411400.1.cds1, TraesCS3A02G455200.1, TraesCS3B02G444800.1.cds1, TraesCS3B02G494000.1, TraesCS3B02G494200.1.cds1, TraesCS3B02G494300.1, TraesCS3B02G494700.1, TraesCS3B02G494800.1.cds1, TraesCS3B02G495200.1.cds1, TraesCS3B02G495300.1.cds1, TraesCS3B02G495500.1, TraesCS3D02G405700.1.cds1, TraesCS3D02G447900.1.cds1, TraesCS3D02G448400.1.cds1, TraesCS3D02G448500.1, TraesCS7D02G020200.1.cds1
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