Basic Information
Locus ID:
Tel1E01G124300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
UPL4
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 70306509 | 70312108 | + | Tel1E01G124300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 147,902.56 Da | 40.70 | 92.06 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 942 | 1330 | 2.95329E-105 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 990 | 1332 | 2.8E-78 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 940 | 1325 | 5.49E-89 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 10 | 424 | 1.57E-21 | IPR016024 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 944 | 1211 | 1.4E-40 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1217 | 1330 | 8.6E-30 | - |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 1078 | 1176 | 1.4E-40 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 8 | 435 | 1.4E-30 | IPR011989 |
| SMART | SM00119 | hect_3 | 952 | 1332 | 3.0E-93 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 966 | 1332 | 62.194626 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 907 | 945 | - | - |
| Coils | Coil | Coil | 560 | 587 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_044363889.1 | E3 ubiquitin-protein ligase UPL4-like [Triticum aestivum] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B5XUV0 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology