Basic Information
Locus ID:
Tel1E01G121700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 68596718 | 68599077 | + | Tel1E01G121700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 75,556.90 Da | 37.85 | 92.39 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 306 | 337 | 2.8195E-4 | - |
| Pfam | PF00069 | Protein kinase domain | 417 | 674 | 3.5E-43 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 31 | 78 | 2.7E-8 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 306 | 342 | 2.83E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 415 | 677 | 9.71E-67 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 258 | 348 | 8.0E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 685 | 3.2E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 388 | 488 | 1.0E-22 | - |
| SMART | SM00179 | egfca_6 | 306 | 348 | 4.2E-6 | IPR001881 |
| SMART | SM00181 | egf_5 | 309 | 348 | 0.46 | IPR000742 |
| SMART | SM00181 | egf_5 | 258 | 305 | 21.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 414 | 685 | 1.1E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 680 | 34.025497 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 306 | 331 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 420 | 442 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 532 | 544 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_020170178.1 | wall-associated receptor kinase 2 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A452XSN7 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology