HalophFGD

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Basic Information
Locus ID: Tel1E01G099600
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: protein dimerization activity
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 57361360 57362971 + Tel1E01G099600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.58 48,559.17 Da 58.65 79.75 -0.25
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 8 70 3.53E-10 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037449282.1 uncharacterized protein LOC119318795 [Triticum dicoccoides] 0
TrEMBL N1QR49 F-box domain-containing protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 BH02.1933, CH02.1946
Poaceae Eleusine coracana subsp. coracana 5 gene-QOZ80_4BG0352940, gene-QOZ80_6AG0533510 ...
gene-QOZ80_6BG0486540, gene-QOZ80_7AG0580130, gene-QOZ80_7BG0611230
Poaceae Lolium multiflorum 4 gene-QYE76_008233, gene-QYE76_008236, gene-QYE76_008837 ...
gene-QYE76_044561
Poaceae Oryza coarctata 2 Oco01G010670, Oco01G011070
Poaceae Oryza sativa 2 LOC_Os01g28520.1, LOC_Os01g32640.1
Poaceae Paspalum vaginatum 1 gene-BS78_02G371000
Poaceae Puccinellia tenuiflora 2 Pt_Chr0500709, Pt_Chr0704898
Poaceae Sporobolus alterniflorus 4 Chr19G000930, Chr25G013870, Chr25G013880, Chr27G016500
Poaceae Thinopyrum elongatum 3 Tel1E01G069100, Tel1E01G099600, Tel1E01G744700
Poaceae Triticum aestivum 8 TraesCS1A02G439200.1, TraesCS1B02G055300.1 ...
TraesCS1B02G474400.1, TraesCS1B02G474600.1, TraesCS1D02G032100.1, TraesCS1D02G048100.1, TraesCS1D02G448100.2, TraesCS6D02G114000.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.