Basic Information
Locus ID:
Tel1E01G096600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 54900424 | 54903143 | - | Tel1E01G096600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 38,108.17 Da | 30.06 | 89.33 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 4 | 174 | 9.24428E-59 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 201 | 355 | 5.41619E-77 | - |
| Pfam | PF00190 | Cupin | 195 | 341 | 3.5E-24 | IPR006045 |
| Pfam | PF00190 | Cupin | 8 | 157 | 8.5E-25 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 7 | 347 | 2.55E-49 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 8 | 180 | 9.2E-30 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 197 | 358 | 1.7E-50 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 198 | 342 | 1.2E-20 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 3 | 160 | 5.9E-31 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 297 | 315 | 1.3E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 214 | 234 | 1.3E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 261 | 277 | 1.3E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 319 | 336 | 1.3E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 279 | 294 | 1.3E-14 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07750.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_037448884.1 | legumin B-like [Triticum dicoccoides] | 0 |
| P07730 | Glutelin type-A 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YSH7 | 11S seed storage protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology