HalophFGD

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Basic Information
Locus ID: Tel1E01G076000
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 37675208 37676137 + Tel1E01G076000
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.44 35,248.86 Da 45.60 80.74 -0.31
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 15 136 1.2682E-16 IPR002083
Pfam PF00651 BTB/POZ domain 159 263 5.3E-23 IPR000210
SUPERFAMILY SSF49599 TRAF domain-like 14 142 6.54E-21 -
SUPERFAMILY SSF54695 POZ domain 144 265 3.92E-30 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 140 298 2.0E-49 IPR011333
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 139 1.4E-22 IPR008974
SMART SM00225 BTB_4 165 267 2.7E-17 IPR000210
ProSiteProfiles PS50144 MATH/TRAF domain profile. 8 136 13.461607 IPR002083
ProSiteProfiles PS50097 BTB domain profile. 165 232 16.90024 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G06190.5 - 0
RefSeq XP_044436879.1 BTB/POZ and MATH domain-containing protein 2-like [Triticum aestivum] 0
Swiss-Prot Q9M8J9 BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 0
TrEMBL A0A3B5ZN13 BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 8 AH08.2117, AH08.2120, BH08.2227, BH08.2231, BH08.2233 ...
CH08.2406, CH08.2413, CH08.2414
Poaceae Eleusine coracana subsp. coracana 17 gene-QOZ80_7BG0590860, gene-QOZ80_8AG0629410 ...
gene-QOZ80_8AG0637760, gene-QOZ80_8AG0637770, gene-QOZ80_8AG0637780, gene-QOZ80_8AG0637790, gene-QOZ80_8AG0637810, gene-QOZ80_8AG0637840, gene-QOZ80_8AG0637850, gene-QOZ80_8AG0637860, gene-QOZ80_8AG0637870, gene-QOZ80_8BG0657720, gene-QOZ80_8BG0666280, gene-QOZ80_8BG0666290, gene-QOZ80_8BG0666300, gene-QOZ80_8BG0666310, gene-QOZ80_8BG0666330
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.1HG0022760.1.CDS1 ...
HORVU.MOREX.r3.7HG0664330.1.CDS1, HORVU.MOREX.r3.7HG0682430.1
Poaceae Lolium multiflorum 19 gene-QYE76_000085, gene-QYE76_009636, gene-QYE76_009638 ...
gene-QYE76_009646, gene-QYE76_009647, gene-QYE76_030105, gene-QYE76_030106, gene-QYE76_030107, gene-QYE76_030114, gene-QYE76_030115, gene-QYE76_030122, gene-QYE76_030164, gene-QYE76_030168, gene-QYE76_030169, gene-QYE76_030178, gene-QYE76_044268, gene-QYE76_044269, gene-QYE76_044273, gene-QYE76_044274
Poaceae Oryza coarctata 5 Oco15G010530, Oco15G010540, Oco15G010550, Oco15G010900 ...
Oco16G012000
Poaceae Oryza sativa 11 LOC_Os03g48120.1, LOC_Os08g40490.1, LOC_Os08g41120.1 ...
LOC_Os08g41150.1, LOC_Os08g41170.1, LOC_Os08g41180.1, LOC_Os08g41190.1, LOC_Os08g41200.1, LOC_Os08g41220.1, LOC_Os08g41240.1, LOC_Os09g06890.1
Poaceae Paspalum vaginatum 18 gene-BS78_07G112800, gene-BS78_07G194700 ...
gene-BS78_07G195100, gene-BS78_07G195200, gene-BS78_07G195400, gene-BS78_07G195500, gene-BS78_07G195600, gene-BS78_07G195800, gene-BS78_07G195900, gene-BS78_07G196000, gene-BS78_07G196100, gene-BS78_07G196400, gene-BS78_07G196500, gene-BS78_07G196600, gene-BS78_07G196700, gene-BS78_07G196900, gene-BS78_07G197000, gene-BS78_07G199000
Poaceae Puccinellia tenuiflora 8 Pt_Chr0403716, Pt_Chr0403738, Pt_Chr0403966, Pt_Chr0501975 ...
Pt_Chr0501977, Pt_Chr0502097, Pt_Chr0600381, Pt_Chr0704303
Poaceae Sporobolus alterniflorus 4 Chr16G017630, Chr17G016920, Chr17G016930, Chr17G016940
Poaceae Thinopyrum elongatum 9 Tel1E01G076000, Tel1E01G077100, Tel1E01G190600 ...
Tel1E01G190700, Tel1E01G191100, Tel1E01G191400, Tel7E01G450400, Tel7E01G450500, Tel7E01G450800
Poaceae Triticum dicoccoides 14 gene_TRIDC1AG004010, gene_TRIDC1AG017170 ...
gene_TRIDC1AG017180, gene_TRIDC1AG017240, gene_TRIDC1BG004930, gene_TRIDC1BG004970, gene_TRIDC1BG017630, gene_TRIDC1BG017640, gene_TRIDC2BG009930, gene_TRIDC4AG047600, gene_TRIDC7AG032950, gene_TRIDC7AG032960, gene_TRIDC7AG032970, gene_TRIDC7BG024090
Poaceae Triticum aestivum 23 TraesCS1A02G093100.1, TraesCS1A02G093500.1 ...
TraesCS1A02G093700.1, TraesCS1B02G044900.1.cds1, TraesCS1B02G050800.1.cds1, TraesCS1B02G120900.1, TraesCS1B02G121000.1.cds1, TraesCS1B02G121300.1.cds1, TraesCS1B02G121700.1.cds1, TraesCS1B02G121800.1, TraesCS1D02G036200.1.cds1, TraesCS1D02G036400.1.cds1, TraesCS1D02G102100.1.cds1, TraesCS1D02G102200.1.cds1, TraesCS1D02G102300.1, TraesCS7A02G255200.1.cds1, TraesCS7A02G255300.2, TraesCS7B02G080600.1.cds1, TraesCS7B02G151400.1.cds1, TraesCS7B02G151500.1, TraesCS7B02G151600.1.cds1, TraesCS7D02G176800.1.cds1, TraesCS7D02G253700.1.cds1
Poaceae Zea mays 9 Zm00001eb035890_P001, Zm00001eb035900_P001 ...
Zm00001eb035910_P001, Zm00001eb035940_P001, Zm00001eb174790_P001, Zm00001eb174830_P001, Zm00001eb174850_P001, Zm00001eb202820_P001, Zm00001eb328550_P001
Poaceae Zoysia japonica 5 nbis-gene-17476, nbis-gene-42645, nbis-gene-42646 ...
nbis-gene-55558, nbis-gene-57528
Poaceae Zoysia macrostachya 10 Zma_g13254, Zma_g23281, Zma_g23282, Zma_g23283, Zma_g23284 ...
Zma_g23286, Zma_g24396, Zma_g24397, Zma_g24398, Zma_g29496
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.