Basic Information
Locus ID:
Tel1E01G055300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 29303186 | 29309872 | - | Tel1E01G055300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 79,642.56 Da | 42.23 | 78.13 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 346 | 381 | 2.91006E-7 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 346 | 388 | 1.5E-8 | IPR001881 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 456 | 716 | 2.8E-45 | IPR001245 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 343 | 389 | 1.1E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 431 | 717 | 8.03E-67 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 301 | 389 | 5.9E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 438 | 528 | 2.8E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 530 | 721 | 2.2E-49 | - |
| SMART | SM00220 | serkin_6 | 452 | 718 | 8.1E-17 | IPR000719 |
| SMART | SM00179 | egfca_6 | 346 | 389 | 2.6E-9 | IPR001881 |
| SMART | SM00181 | egf_5 | 296 | 345 | 240.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 349 | 389 | 0.0037 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 346 | 389 | 10.823486 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 452 | 718 | 33.064388 | IPR000719 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 364 | 375 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 458 | 482 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 346 | 373 | - | IPR018097 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_047051221.1 | wall-associated receptor kinase 4-like [Lolium rigidum] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A368SAV9 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_8G185300v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology