Basic Information
Locus ID:
Tel1E01G034000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 17955922 | 17959011 | + | Tel1E01G034000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 47,130.67 Da | 42.52 | 85.93 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 32 | 66 | 1.9E-9 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 31 | 84 | 3.4E-14 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 47 | 283 | 1.7E-6 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 28 | 74 | 4.5E-8 | - |
| SMART | SM00256 | fbox_2 | 34 | 74 | 7.3E-7 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49610.1 | F-box family protein. | 0 |
| RefSeq | XP_044354752.1 | putative F-box protein At2g16220 [Triticum aestivum] | 0 |
| Q9FGY4 | F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5ZNM7 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0160610.1.CDS1 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G031600, Tel1E01G034000, Tel1E01G034500 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G012400.1.cds1, TraesCS1A02G014200.1.cds1 ... |