Basic Information
Locus ID:
Tel1E01G016500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Ribosome inactivating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 8645292 | 8648830 | - | Tel1E01G016500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 74,275.43 Da | 46.36 | 79.54 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00161 | Ribosome inactivating protein | 16 | 217 | 1.1E-49 | IPR001574 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 13 | 220 | 2.75E-39 | IPR036041 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 2 | 179 | 2.3E-44 | IPR016138 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 622 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 641 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044352518.1 | uncharacterized protein LOC123072908 isoform X2 [Triticum aestivum] | 0 |
| P04399 | Protein synthesis inhibitor II OS=Hordeum vulgare OX=4513 GN=RIP30A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6UCG2 | rRNA N-glycosidase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology