Basic Information
Locus ID:
TC12G2109
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
receptor protein kinase TMK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 75052745 | 75056223 | + | TC12G2109 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 100,628.56 Da | 39.47 | 86.36 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 587 | 859 | 2.69568E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 379 | 420 | 3.0E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 108 | 143 | 1.2E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 319 | 357 | 0.0047 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 58 | 1.5E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 584 | 850 | 1.4E-48 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 427 | 2.81E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 557 | 856 | 7.1E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 544 | 658 | 1.6E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 659 | 881 | 1.5E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 316 | 8.3E-75 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 319 | 445 | 4.2E-32 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 107 | 130 | 4.0E-5 | IPR003591 |
| SMART | SM00220 | serkin_6 | 581 | 860 | 8.3E-43 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 84 | 106 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 204 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 383 | 407 | 26.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 581 | 860 | 41.403446 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 706 | 718 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 587 | 609 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 906 | 928 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 469 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010650399.1 | PREDICTED: receptor-like kinase TMK4 [Vitis vinifera] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A1VLR2 | Putative receptor protein kinase TMK1 OS=Morella rubra OX=262757 GN=CJ030_MR5G023026 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology