Basic Information
Locus ID:
TC12G1987
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
CRK1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 71520461 | 71524469 | - | TC12G1987 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 65,476.57 Da | 44.91 | 87.85 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 126 | 388 | 2.92358E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 127 | 389 | 1.2E-69 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 418 | 576 | 2.04E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 123 | 428 | 4.45E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 414 | 573 | 3.4E-15 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 119 | 216 | 3.4E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 217 | 401 | 5.8E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 413 | 503 | 3.4E-15 | - |
| SMART | SM00220 | serkin_6 | 127 | 389 | 4.6E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 127 | 389 | 49.784908 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 133 | 159 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 251 | 263 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_021744694.1 | CDPK-related kinase 7-like [Chenopodium quinoa] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MJ50 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology