Basic Information
Locus ID:
TC12G1519
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 58848399 | 58852066 | + | TC12G1519 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 54,488.25 Da | 41.29 | 79.20 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 183 | 445 | 4.3E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 165 | 471 | 2.73E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 153 | 254 | 5.8E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 257 | 467 | 1.9E-58 | - |
| SMART | SM00220 | serkin_6 | 180 | 446 | 2.6E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 180 | 483 | 33.120922 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 186 | 208 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 299 | 311 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 42 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_048497338.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X6 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QVA5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_137550 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology