Basic Information
Locus ID:
TC12G1491
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 58069086 | 58072145 | - | TC12G1491 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 111,998.95 Da | 48.11 | 64.69 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 260 | 343 | 9.75454E-28 | - |
| Pfam | PF00855 | PWWP domain | 260 | 343 | 1.2E-17 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 256 | 358 | 3.49E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 248 | 357 | 3.4E-24 | - |
| SMART | SM00293 | PWWP_4 | 260 | 321 | 8.5E-13 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 262 | 323 | 14.100221 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 589 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 604 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 823 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 913 | 964 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 752 | 781 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 504 | 560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 504 | 637 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 730 | 751 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.2 | - | 0 |
| RefSeq | XP_021765690.1 | uncharacterized protein LOC110730216 [Chenopodium quinoa] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9CKA6 | PWWP domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology