Basic Information
Locus ID:
TC12G1454
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
histone deacetylation
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 57067689 | 57068879 | - | TC12G1454 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.79 | 46,042.82 Da | 44.38 | 82.17 | -0.19 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_050271396.1 | putative F-box protein At4g17565 [Quercus robur] | 0 |
| TrEMBL | A0A7N2KZ90 | DUF295 domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103720058, gene-LOC120104557 |
| Cymodoceaceae | Cymodocea nodosa | 3 | gene.Cymno04g18060, gene.Cymno05g00800, gene.Cymno05g00830 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g14040, gene.Thate09g04500 |
| Posidoniaceae | Posidonia oceanica | 16 | gene.Posoc01g02010, gene.Posoc01g02020, gene.Posoc01g02060 ... |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1454 |
| Zosteraceae | Zostera marina | 1 | Zosma06g00150.v3.1 |