Basic Information
Locus ID:
TC12G1251
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Tyr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 51844247 | 51844706 | + | TC12G1251 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 11,314.70 Da | 29.02 | 66.86 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 38 | 86 | 5.83E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 89 | 1.2E-6 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48210.4 | - | 0 |
| RefSeq | XP_024993552.1 | pto-interacting protein 1 isoform X2 [Cynara cardunculus var. scolymus] | 0 |
| Q41328 | Pto-interacting protein 1 OS=Solanum lycopersicum OX=4081 GN=PTI1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A103XT61 | Protein kinase domain-containing protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_001500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_08.2985.V1.1, AsparagusV1_08.2986.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB08g035540.2N |
| Poaceae | Zoysia japonica | 1 | nbis-gene-50151 |
| Tamaricaceae | Tamarix chinensis | 4 | TC02G1743, TC05G0361, TC05G0510, TC12G1251 |