Basic Information
Locus ID:
TC12G1101
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 47876740 | 47882145 | + | TC12G1101 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 71,538.40 Da | 45.44 | 83.01 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 147 | 409 | 2.07405E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 148 | 410 | 2.1E-68 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 441 | 591 | 4.29E-18 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 145 | 438 | 1.35E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 141 | 237 | 5.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 238 | 419 | 4.8E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 428 | 519 | 2.0E-19 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 435 | 589 | 2.0E-19 | - |
| SMART | SM00220 | serkin_6 | 148 | 410 | 8.3E-100 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 452 | 487 | 8.655371 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 148 | 410 | 50.731884 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 272 | 284 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 154 | 180 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_034680888.1 | CDPK-related kinase 5-like [Vitis riparia] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9ATF4 | Calcium/calmodulin-dependent protein kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology