halophFGD

Basic Information

Locus ID: TC12G1046

Species & Taxonomic ID: Tamarix chinensis & 189791

Genome Assembly: GCA_030549775.1

Description: proline-rich receptor-like protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr12	46706870	46707432	-	TC12G1046

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.15	16,176.62 Da	64.66	65.50	-0.66

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	115	137	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	115	149	-	-

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G24550.1	proline extensin-like receptor kinase 1. encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.
RefSeq	XP_021738600.1	putative proline-rich receptor-like protein kinase PERK6 [Chenopodium quinoa]
Swiss-Prot	Q9LV48	Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1
TrEMBL	A0A803LP49	Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	4	Ag6G02584, Ag7G01257, Ag9G00050, Ag9G00100
Poaceae	Zoysia japonica	2	nbis-gene-16347, nbis-gene-3962
Tamaricaceae	Tamarix chinensis	1	TC12G1046