Basic Information
Locus ID:
TC12G0961
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 44159048 | 44164600 | + | TC12G0961 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 36,705.29 Da | 51.39 | 67.95 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 16 | 187 | 1.6E-78 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 112 | 185 | 8.1E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 9 | 110 | 6.2E-44 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 322 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.3 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_034927689.1 | ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X1 [Populus alba] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | U5G485 | Ubiquitin fusion degradation protein 1 homolog OS=Populus trichocarpa OX=3694 GN=POPTR_009G124900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology