Basic Information
Locus ID:
TC12G0363
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 20999074 | 21004208 | + | TC12G0363 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.72 | 183,026.30 Da | 48.04 | 70.21 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 1042 | 1128 | 1.21643E-28 | - |
| Pfam | PF00855 | PWWP domain | 1042 | 1128 | 4.3E-15 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 1039 | 1152 | 7.82E-25 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 1034 | 1136 | 2.2E-23 | - |
| SMART | SM00293 | PWWP_4 | 1042 | 1103 | 1.9E-11 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 1044 | 1105 | 14.346401 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1521 | 1557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1381 | 1434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 986 | 1012 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1523 | 1543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1381 | 1414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1420 | 1434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1473 | 1496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 964 | 1012 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021741059.1 | uncharacterized protein LOC110707345 [Chenopodium quinoa] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MAI6 | PWWP domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology