Basic Information
Locus ID:
TC12G0115
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 6337665 | 6388915 | - | TC12G0115 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 59,851.85 Da | 58.20 | 75.22 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 143 | 1.1E-54 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 231 | 375 | 4.3E-67 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 5 | 146 | 2.49E-21 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 235 | 379 | 4.25E-20 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 147 | 5.9E-15 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 239 | 362 | 2.2E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 406 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_021771091.1 | uncharacterized protein LOC110735216 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0K9RBQ9 | DUF569 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_088580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology