Basic Information
Locus ID:
TC11G2248
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Glutelin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 80295821 | 80297199 | + | TC11G2248 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 39,076.56 Da | 33.70 | 90.92 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 3 | 175 | 2.4493E-68 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 201 | 356 | 1.21305E-80 | - |
| Pfam | PF00190 | Cupin | 199 | 341 | 3.5E-25 | IPR006045 |
| Pfam | PF00190 | Cupin | 11 | 156 | 5.3E-27 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 15 | 348 | 5.48E-52 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 8 | 178 | 2.4E-33 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 198 | 359 | 6.9E-53 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 159 | 4.6E-35 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 198 | 342 | 2.7E-19 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 261 | 277 | 1.8E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 279 | 294 | 1.8E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 214 | 234 | 1.8E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 297 | 315 | 1.8E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 319 | 336 | 1.8E-14 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_010685841.1 | glutelin type-B 5 [Beta vulgaris subsp. vulgaris] | 0 |
| P07728 | Glutelin type-A 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LCP3 | 11-S seed storage protein, plant OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology