Basic Information
Locus ID:
TC11G2086
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 75215413 | 75218264 | - | TC11G2086 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 34,782.56 Da | 45.99 | 67.51 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 31 | 179 | 3.5E-60 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 25 | 126 | 1.2E-39 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 127 | 187 | 2.1E-19 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 259 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_010685726.1 | ubiquitin recognition factor in ER-associated degradation protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7N2KPD4 | Ubiquitin fusion degradation protein 1 homolog OS=Quercus lobata OX=97700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology