Basic Information
Locus ID:
TC11G1843
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 63021834 | 63026667 | + | TC11G1843 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 78,728.56 Da | 35.46 | 83.55 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 392 | 590 | 7.0E-29 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 147 | 205 | 1.1E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 392 | 663 | 1.4E-49 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 242 | 2.42E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 53 | 169 | 1.5E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 357 | 463 | 4.5E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 685 | 1.4E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 170 | 261 | 4.7E-17 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 388 | 662 | 27.184641 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 278 | - | - |
| Coils | Coil | Coil | 645 | 672 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021843964.1 | pollen receptor-like kinase 4 [Spinacia oleracea] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803NCK5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology