halophFGD

Basic Information

Locus ID: TC11G1234

Species & Taxonomic ID: Tamarix chinensis & 189791

Genome Assembly: GCA_030549775.1

Description: Speckle-type POZ protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr11	36310402	36316062	+	TC11G1234

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.28	45,939.09 Da	45.01	88.61	-0.08

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	28	161	2.50798E-26	IPR002083
CDD	cd18280	BTB_POZ_BPM_plant	183	320	3.67426E-47	-
Pfam	PF00651	BTB/POZ domain	189	247	1.4E-12	IPR000210
Pfam	PF00651	BTB/POZ domain	258	322	9.8E-6	IPR000210
SUPERFAMILY	SSF49599	TRAF domain-like	25	164	2.45E-31	-
SUPERFAMILY	SSF54695	POZ domain	173	322	1.77E-23	IPR011333
Gene3D	G3DSA:1.25.40.420	-	322	391	1.8E-11	-
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	173	317	1.6E-28	IPR011333
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	26	164	8.9E-31	IPR008974
SMART	SM00061	math_3	32	144	4.6E-9	IPR002083
SMART	SM00225	BTB_4	197	323	9.0E-20	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	197	278	16.548645	IPR000210
ProSiteProfiles	PS50144	MATH/TRAF domain profile.	27	161	21.362583	IPR002083
MobiDBLite	mobidb-lite	consensus disorder prediction	398	417	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G03740.1	BTB-POZ and MATH domain 4.
RefSeq	XP_012066296.1	BTB/POZ and MATH domain-containing protein 4 [Jatropha curcas]
Swiss-Prot	Q9SRV1	BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1
TrEMBL	A0A7J6VMA0	BTB/POZ and MATH domain-containing protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_024177 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg14322, jg16113, jg16384, jg2636, jg35271, jg37665, jg37666 ... jg8483, jg8827
Aizoaceae	Mesembryanthemum crystallinum	6	gene_15310, gene_16533, gene_2700, gene_2701, gene_2702 ... gene_6881
Amaranthaceae	Atriplex hortensis	4	Ah020038, Ah020040, Ah027786, Ah035176
Amaranthaceae	Beta vulgaris	2	BVRB_2g025440, BVRB_7g171670
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg1503, Sbi_jg21300, Sbi_jg22553, Sbi_jg35050 ... Sbi_jg38157, Sbi_jg38160, Sbi_jg6279, Sbi_jg6281
Amaranthaceae	Salicornia europaea	4	Seu_jg15569, Seu_jg15572, Seu_jg16441, Seu_jg3243
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00003417, GOSA_00003609, GOSA_00003612, GOSA_00003613 ... GOSA_00016356
Amaranthaceae	Suaeda glauca	13	Sgl01558, Sgl01565, Sgl06728, Sgl06734, Sgl14703, Sgl21564 ... Sgl25565, Sgl26882, Sgl30715, Sgl62537, Sgl67081, Sgl72677, Sgl76214
Amaranthaceae	Chenopodium album	12	gene:ENSEOMG00000008529, gene:ENSEOMG00000010315 ... gene:ENSEOMG00000013130, gene:ENSEOMG00000018172, gene:ENSEOMG00000019563, gene:ENSEOMG00000030323, gene:ENSEOMG00000030571, gene:ENSEOMG00000035625, gene:ENSEOMG00000038474, gene:ENSEOMG00000044301, gene:ENSEOMG00000045343, gene:ENSEOMG00000048848
Amaranthaceae	Chenopodium quinoa	9	CQ.Regalona.r1.1BG0018790, CQ.Regalona.r1.2AG0020550 ... CQ.Regalona.r1.3AG0013190, CQ.Regalona.r1.3AG0013200, CQ.Regalona.r1.3AG0013220, CQ.Regalona.r1.3BG0013190, CQ.Regalona.r1.3BG0013200, CQ.Regalona.r1.7AG0004930, CQ.Regalona.r1.9BG0000830
Anacardiaceae	Pistacia vera	4	pistato.v30054720, pistato.v30109370, pistato.v30175890 ... pistato.v30237640
Apiaceae	Apium graveolens	7	Ag10G01193, Ag1G01042, Ag1G01912, Ag4G02014, Ag5G01369 ... Ag9G01816, Ag9G02175
Arecaceae	Cocos nucifera	4	COCNU_02G017480, COCNU_03G000580, COCNU_08G001560 ... COCNU_16G008340
Arecaceae	Phoenix dactylifera	4	gene-LOC103704136, gene-LOC103706933, gene-LOC103716759 ... gene-LOC103720364
Asparagaceae	Asparagus officinalis	7	AsparagusV1_01.3400.V1.1, AsparagusV1_05.1697.V1.1 ... AsparagusV1_05.294.V1.1, AsparagusV1_05.629.V1.1, AsparagusV1_05.631.V1.1, AsparagusV1_07.129.V1.1, AsparagusV1_07.893.V1.1
Asteraceae	Flaveria trinervia	6	Ftri11G17734, Ftri12G33335, Ftri14G30279, Ftri17G21543 ... Ftri8G28314, Ftri9G08552
Brassicaceae	Arabidopsis thaliana	6	AT2G39760.1, AT3G03740.1, AT3G06190.1, AT3G43700.1 ... AT5G19000.2, AT5G21010.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10013671m.g.v1.0, Thhalv10013699m.g.v1.0 ... Thhalv10017774m.g.v1.0, Thhalv10020746m.g.v1.0, Thhalv10020850m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp3g02710.v2.2, Sp3g05130.v2.2, Sp4g22030.v2.2 ... Sp6g23520.v2.2, Sp6g25390.v2.2
Brassicaceae	Brassica nigra	17	BniB01g005500.2N, BniB01g012290.2N, BniB01g057420.2N ... BniB02g041920.2N, BniB02g043830.2N, BniB03g024740.2N, BniB05g042590.2N, BniB05g044030.2N, BniB05g044820.2N, BniB05g056710.2N, BniB06g041440.2N, BniB06g055920.2N, BniB07g059780.2N, BniB07g060520.2N, BniB08g009650.2N, BniB08g010780.2N, BniB08g025550.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq02G1160, Ceq05G1507, Ceq06G2168, Ceq08G1442, Ceq09G1274
Casuarinaceae	Casuarina glauca	6	Cgl02G1201, Cgl05G1491, Cgl05G1494, Cgl06G2281, Cgl08G1473 ... Cgl09G1363
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno04g06030, gene.Cymno04g17400, gene.Cymno05g05700 ... gene.Cymno18g01900
Dunaliellaceae	Dunaliella salina	2	Dusal.0330s00009.v1.0, Dusal.0617s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	7	gene.Thate01g34420, gene.Thate02g15590, gene.Thate03g10820 ... gene.Thate04g24670, gene.Thate05g00360, gene.Thate06g00250, gene.Thate06g21960
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-12048, nbisL1-mrna-3662, nbisL1-mrna-8209
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG02.1778, evm.TU.LG03.1999, evm.TU.LG04.1009 ... evm.TU.LG11.1425
Plantaginaceae	Plantago ovata	3	Pov_00008130, Pov_00015759, Pov_00028975
Plumbaginaceae	Limonium bicolor	6	Lb2G09429, Lb4G22091, Lb4G22092, Lb6G29765, Lb7G34709 ... Lb8G35594
Poaceae	Echinochloa crus-galli	15	AH01.1016, AH01.166, AH03.11, AH03.328, AH03.3916, BH01.1157 ... BH02.1562, BH03.10, BH03.3917, BH03.407, BH04.2026, CH01.434, CH03.18, CH03.477, CH05.3686
Poaceae	Eleusine coracana subsp. coracana	16	gene-QOZ80_1BG0063830, gene-QOZ80_3AG0213070 ... gene-QOZ80_3BG0258220, gene-QOZ80_6AG0509660, gene-QOZ80_7AG0552570, gene-QOZ80_7AG0556900, gene-QOZ80_7AG0579900, gene-QOZ80_7BG0583650, gene-QOZ80_7BG0587840, gene-QOZ80_7BG0611040, gene-QOZ80_8AG0621160, gene-QOZ80_8AG0623130, gene-QOZ80_8BG0650780, gene-QOZ80_8BG0651000, gene-QOZ80_9AG0689710, gene-QOZ80_9AG0689780
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.1HG0021090.1.CDS1 ... HORVU.MOREX.r3.2HG0118000.1, HORVU.MOREX.r3.2HG0148240.1, HORVU.MOREX.r3.2HG0158020.1, HORVU.MOREX.r3.2HG0180830.1.CDS1, HORVU.MOREX.r3.2HG0180890.1.CDS1, HORVU.MOREX.r3.5HG0428350.1.CDS1, HORVU.MOREX.r3.5HG0517600.1
Poaceae	Lolium multiflorum	19	gene-QYE76_009435, gene-QYE76_009438, gene-QYE76_009440 ... gene-QYE76_030704, gene-QYE76_030727, gene-QYE76_032440, gene-QYE76_039176, gene-QYE76_042664, gene-QYE76_043122, gene-QYE76_045027, gene-QYE76_045028, gene-QYE76_045041, gene-QYE76_045042, gene-QYE76_045046, gene-QYE76_047039, gene-QYE76_061440, gene-QYE76_062052, gene-QYE76_062131, gene-QYE76_066058
Poaceae	Oryza coarctata	12	Oco05G025760, Oco06G026630, Oco13G000050, Oco13G002130 ... Oco13G014450, Oco14G000080, Oco14G002220, Oco14G015320, Oco15G004510, Oco15G007930, Oco16G004210, Oco16G004230
Poaceae	Oryza sativa	7	LOC_Os03g57854.1, LOC_Os07g01140.1, LOC_Os07g07270.1 ... LOC_Os07g46160.1, LOC_Os08g31420.1, LOC_Os08g31430.1, LOC_Os08g31450.1
Poaceae	Paspalum vaginatum	11	gene-BS78_01G054500, gene-BS78_02G000400, gene-BS78_K171300 ... gene-BS78_02G044500, gene-BS78_02G373100, gene-BS78_07G088600, gene-BS78_07G089400, gene-BS78_07G089600, gene-BS78_10G050100, gene-BS78_K171400, gene-BS78_K171600
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0106395, Pt_Chr0200519, Pt_Chr0206216, Pt_Chr0301071 ... Pt_Chr0302144, Pt_Chr0303642, Pt_Chr0307435
Poaceae	Sporobolus alterniflorus	19	Chr01G003110, Chr02G012620, Chr04G030280, Chr07G029320 ... Chr0G002920, Chr0G003110, Chr0G004890, Chr0G018270, Chr11G022450, Chr12G034980, Chr19G001030, Chr19G017510, Chr20G009920, Chr24G000830, Chr24G002870, Chr24G013480, Chr27G016340, Chr28G000060, Chr28G001450
Poaceae	Thinopyrum elongatum	7	Tel2E01G278600, Tel2E01G451700, Tel2E01G485000 ... Tel3E01G033300, Tel5E01G672100, Tel7E01G054700, Tel7E01G877100
Poaceae	Triticum dicoccoides	16	gene_TRIDC1AG016020, gene_TRIDC1BG016010 ... gene_TRIDC2AG016820, gene_TRIDC2AG032480, gene_TRIDC2AG035840, gene_TRIDC2BG020480, gene_TRIDC2BG037460, gene_TRIDC2BG041630, gene_TRIDC2BG055970, gene_TRIDC2BG077340, gene_TRIDC3BG004140, gene_TRIDC4AG068140, gene_TRIDC5AG062030, gene_TRIDC5BG066220, gene_TRIDC7BG066960, gene_TRIDC7BG067180
Poaceae	Triticum aestivum	37	TraesCS1A02G101100.1.cds1, TraesCS1B02G111900.1.cds1 ... TraesCS1D02G093200.1.cds1, TraesCS2A02G135800.1, TraesCS2A02G237800.1, TraesCS2A02G255800.1, TraesCS2A02G366500.1.cds1, TraesCS2B02G159700.1, TraesCS2B02G262200.1, TraesCS2B02G383800.1, TraesCS2D02G138300.1, TraesCS2D02G246900.1, TraesCS2D02G266900.1, TraesCS2D02G363000.1, TraesCS2D02G363600.1.cds1, TraesCS2D02G508700.1, TraesCS3A02G019700.1.cds1, TraesCS3A02G020200.1.cds1, TraesCS3A02G020800.1.cds1, TraesCS3B02G025700.1, TraesCS3B02G026400.1.cds1, TraesCS3B02G060200.1.cds1, TraesCS3D02G026500.1, TraesCS3D02G026900.1.cds1, TraesCS3D02G352200.1.cds1, TraesCS4A02G462500.1.cds1, TraesCS5A02G429400.2, TraesCS5B02G042000.1.cds1, TraesCS5B02G042200.1.cds1, TraesCS5B02G431400.2, TraesCS5D02G437400.1, TraesCS6B02G051500.1.cds1, TraesCS7A02G026200.1, TraesCS7A02G403400.1.cds1, TraesCS7B02G421900.1.cds1, TraesCS7D02G024000.1.cds1, TraesCS7D02G500400.1.cds1
Poaceae	Zea mays	8	Zm00001eb060340_P003, Zm00001eb110590_P001 ... Zm00001eb118370_P001, Zm00001eb167500_P001, Zm00001eb213160_P002, Zm00001eb300900_P003, Zm00001eb329510_P001, Zm00001eb414130_P001
Poaceae	Zoysia japonica	7	nbis-gene-15319, nbis-gene-16435, nbis-gene-207 ... nbis-gene-26903, nbis-gene-33150, nbis-gene-35714, nbis-gene-52652
Poaceae	Zoysia macrostachya	7	Zma_g2601, Zma_g312, Zma_g4645, Zma_g4782, Zma_g5697 ... Zma_g6036, Zma_g6988
Portulacaceae	Portulaca oleracea	10	evm.TU.LG02.2035, evm.TU.LG04.2707, evm.TU.LG05.931 ... evm.TU.LG06.1648, evm.TU.LG06.659, evm.TU.LG08.347, evm.TU.LG11.1000, evm.TU.LG11.1001, evm.TU.LG23.282, evm.TU.LG25.407
Posidoniaceae	Posidonia oceanica	4	gene.Posoc01g05930, gene.Posoc01g11840, gene.Posoc01g38420 ... gene.Posoc07g09370
Rhizophoraceae	Bruguiera sexangula	7	evm.TU.Scaffold_11_RagTag.365, evm.TU.Scaffold_1_RagTag.446 ... evm.TU.Scaffold_2_RagTag.1801, evm.TU.Scaffold_3_RagTag.501, evm.TU.Scaffold_4_RagTag.1755, evm.TU.Scaffold_5_RagTag.944, evm.TU.Scaffold_6_RagTag.682
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-11397, nbisL1-mrna-14050, nbisL1-mrna-1461 ... nbisL1-mrna-3004, nbisL1-mrna-3164, nbisL1-mrna-7731
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-10205, nbisL1-mrna-12373, nbisL1-mrna-16057 ... nbisL1-mrna-4832
Rhizophoraceae	Ceriops zippeliana	7	nbisL1-mrna-11562, nbisL1-mrna-13906, nbisL1-mrna-14205 ... nbisL1-mrna-4558, nbisL1-mrna-5478, nbisL1-mrna-573, nbisL1-mrna-6222
Rhizophoraceae	Kandelia candel	7	evm.TU.utg000005l.130, evm.TU.utg000006l.276 ... evm.TU.utg000008l.982, evm.TU.utg000009l.219, evm.TU.utg000011l.413, evm.TU.utg000012l.273, evm.TU.utg000019l.917
Rhizophoraceae	Kandelia obovata	7	Maker00000334, Maker00005545, Maker00008163, Maker00010135 ... Maker00011466, Maker00012918, Maker00013073
Rhizophoraceae	Rhizophora apiculata	7	nbisL1-mrna-10015, nbisL1-mrna-12817, nbisL1-mrna-15361 ... nbisL1-mrna-2071, nbisL1-mrna-474, nbisL1-mrna-6312, nbisL1-mrna-8523
Rhizophoraceae	Rhizophora mangle	7	nbisL1-mrna-16383, nbisL1-mrna-19570, nbisL1-mrna-2072 ... nbisL1-mrna-3421, nbisL1-mrna-593, nbisL1-mrna-7565, nbisL1-mrna-9429
Salicaceae	Populus euphratica	9	populus_peu06469, populus_peu07849, populus_peu08516 ... populus_peu19346, populus_peu20330, populus_peu24557, populus_peu36834, populus_peu37226, populus_peu37301
Solanaceae	Lycium barbarum	5	gene-LOC132600749, gene-LOC132609657, gene-LOC132626285 ... gene-LOC132640349, gene-LOC132645016
Solanaceae	Solanum chilense	3	SOLCI002491000, SOLCI002717300, SOLCI007372200
Solanaceae	Solanum pennellii	5	gene-LOC107002925, gene-LOC107007886, gene-LOC107008083 ... gene-LOC107018523, gene-LOC107031361
Tamaricaceae	Reaumuria soongarica	6	STRG.14982_chr08_+, STRG.4605_chr02_+, STRG.9445_chr03_- ... gene_10661, gene_11055, gene_12221
Tamaricaceae	Tamarix chinensis	8	TC04G0306, TC05G1490, TC05G3059, TC06G2080, TC08G0861 ... TC09G0711, TC11G1234, TC12G1482
Zosteraceae	Zostera marina	4	Zosma02g03460.v3.1, Zosma02g20660.v3.1, Zosma03g17350.v3.1 ... Zosma04g20790.v3.1