Basic Information
Locus ID:
TC11G1088
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 30639515 | 30645887 | - | TC11G1088 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.64 | 75,217.57 Da | 41.98 | 86.17 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 387 | 666 | 1.89281E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 70 | 5.1E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 385 | 661 | 5.5E-35 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 235 | 1.81E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 664 | 3.28E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 460 | 679 | 1.0E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 240 | 4.7E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 189 | 1.1E-33 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 459 | 1.3E-20 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 101 | 123 | 7.119001 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 381 | 680 | 33.95483 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 387 | 409 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 671 | 695 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 695 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 270 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68400.1 | leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_021749631.1 | probable leucine-rich repeat receptor-like protein kinase At1g68400 [Chenopodium quinoa] | 0 |
| Q9M9C5 | Probable leucine-rich repeat receptor-like protein kinase At1g68400 OS=Arabidopsis thaliana OX=3702 GN=At1g68400 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MYL5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg34958, jg5248 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_4043 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah025656 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g142530 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12847, Sbi_jg53034 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8828 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00026419, GOSA_00026420 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl32824, Sgl38106 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000000289, gene:ENSEOMG00000024624 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0013930, CQ.Regalona.r1.6BG0014720 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30214240 |
| Apiaceae | Apium graveolens | 1 | Ag1G01581 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G006210, COCNU_03G008790 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103718828, gene-LOC103723274 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G01231, Ftri5G01166 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G68400.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10018235m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g23460.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g064990.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G2012 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G2204 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g01310 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g27760 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.1519 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00019193 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb4G22785, Lb4G22790, Lb4G22791 |
| Poaceae | Echinochloa crus-galli | 1 | CH02.875 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0008600, gene-QOZ80_1BG0057340 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0225880.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_037746, gene-QYE76_048930 |
| Poaceae | Oryza coarctata | 2 | Oco01G001360, Oco02G001370 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g04230.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G075200 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0205489, Pt_Chr0205555, Pt_Chr0205642 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G024070, Chr03G003730, Chr05G002030 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G083800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG004050, gene_TRIDC3BG006250 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G037200.1, TraesCS3B02G046700.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb125150_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-57085, nbis-gene-7039 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g9918 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG13.703, evm.TU.LG21.390 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g02180 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_15_RagTag.53 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26358 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13011 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17399 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.35 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00004668 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-11688 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2875 |
| Salicaceae | Populus euphratica | 1 | populus_peu21061 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132641744 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107018471 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_3603 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G1088 |
| Zosteraceae | Zostera marina | 2 | Zosma03g01130.v3.1, Zosma06g06600.v3.1 |