Basic Information
Locus ID:
TC11G0618
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 15855068 | 15858130 | + | TC11G0618 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 35,257.27 Da | 45.87 | 72.26 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 75 | 319 | 8.5E-85 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 208 | 309 | 5.4E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 206 | 321 | 5.6E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 209 | 310 | 25.110106 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 179 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22670.1 | indoleacetic acid-induced protein 8. IAA8 (IAA8) gene is auxin inducible. | 0 |
| RefSeq | XP_031260497.1 | auxin-responsive protein IAA9 isoform X2 [Pistacia vera] | 0 |
| Q38826 | Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P4A9B9 | Auxin-responsive protein OS=Ziziphus jujuba OX=326968 GN=LOC107425031 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology