Basic Information
Locus ID:
TC11G0539
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 13247944 | 13249902 | - | TC11G0539 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 72,407.00 Da | 45.82 | 93.60 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 376 | 629 | 4.0E-36 | IPR000719 |
| Pfam | PF01476 | LysM domain | 187 | 231 | 0.018 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 632 | 2.05E-62 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 170 | 245 | 1.5E-5 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 433 | 647 | 1.3E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 431 | 7.2E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 364 | 636 | 30.986687 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 185 | 230 | 10.071218 | IPR018392 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 477 | 489 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 261 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_048501773.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9F754 | LysM domain receptor-like kinase 4 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology