Basic Information
Locus ID:
TC10G1917
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 56852658 | 56859631 | + | TC10G1917 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 78,125.15 Da | 47.77 | 83.09 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 426 | 690 | 8.34535E-86 | - |
| CDD | cd12087 | TM_EGFR-like | 283 | 313 | 0.00253997 | - |
| Pfam | PF13855 | Leucine rich repeat | 159 | 201 | 3.5E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 422 | 687 | 1.1E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 5.5E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 233 | 2.55E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 687 | 8.34E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 392 | 496 | 1.6E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 713 | 2.9E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 248 | 8.1E-46 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 420 | 690 | 33.544941 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 190 | 212 | 7.1036 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 699 | 718 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 274 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_021761852.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like [Chenopodium quinoa] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M9M6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology