Basic Information
Locus ID:
TC10G1904
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 56490487 | 56492082 | + | TC10G1904 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 58,732.87 Da | 28.61 | 83.75 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00161 | Ribosome inactivating protein | 9 | 195 | 2.5E-41 | IPR001574 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 9 | 243 | 7.73E-39 | IPR036041 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 1 | 153 | 8.4E-38 | IPR016138 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 58 | 73 | 6.9E-7 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 113 | 127 | 6.9E-7 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 10 | 23 | 6.9E-7 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 143 | 163 | 6.9E-7 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 178 | 195 | 6.9E-7 | IPR017989 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021755638.1 | 60 kDa jasmonate-induced protein-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803LXX3 | rRNA N-glycosylase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology