halophFGD

Basic Information

Locus ID: TC10G1613

Species & Taxonomic ID: Tamarix chinensis & 189791

Genome Assembly: GCA_030549775.1

Description: Disease resistance protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	45244098	45248148	-	TC10G1613

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.18	85,325.52 Da	44.59	99.16	-0.08

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF52058	L domain-like	87	715	1.7E-21	-
Gene3D	G3DSA:1.10.10.10	-	7	98	1.9E-8	IPR036388
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	128	519	6.2E-19	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	520	723	1.9E-7	IPR032675

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_019078424.1	PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]	0
TrEMBL	A0A5J5B9S5	NB-ARC domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_025818 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	19	jg15580, jg15801, jg26658, jg31416, jg3789, jg3790, jg3798 ... jg3801, jg3808, jg39661, jg4199, jg4200, jg4206, jg4235, jg4240, jg4241, jg435, jg533, jg75
Aizoaceae	Mesembryanthemum crystallinum	6	gene_25383, gene_25384, gene_25389, gene_5625, gene_6765 ... gene_6766
Amaranthaceae	Atriplex hortensis	7	Ah024639, Ah028812, Ah028818, Ah028820, Ah028821, Ah028822 ... Ah028825
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00002858, GOSA_00022539
Amaranthaceae	Suaeda glauca	1	Sgl77020
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000036300, gene:ENSEOMG00000037174 ... gene:ENSEOMG00000038184, gene:ENSEOMG00000038643, gene:ENSEOMG00000040712, gene:ENSEOMG00000041770
Anacardiaceae	Pistacia vera	47	pistato.v30032160, pistato.v30032210, pistato.v30032330 ... pistato.v30032370, pistato.v30032420, pistato.v30032470, pistato.v30032530, pistato.v30032610, pistato.v30032620, pistato.v30032660, pistato.v30032670, pistato.v30032720, pistato.v30032740, pistato.v30032850, pistato.v30032870, pistato.v30032880, pistato.v30032910, pistato.v30032920, pistato.v30032930, pistato.v30033300, pistato.v30086980, pistato.v30098290, pistato.v30110770, pistato.v30110780, pistato.v30173660, pistato.v30173850, pistato.v30194600, pistato.v30195570, pistato.v30195600, pistato.v30198980, pistato.v30199020, pistato.v30242510, pistato.v30242540, pistato.v30242550, pistato.v30246440, pistato.v30246590, pistato.v30246600, pistato.v30246610, pistato.v30246630, pistato.v30246690, pistato.v30246800, pistato.v30246810, pistato.v30246830, pistato.v30286030, pistato.v30286040, pistato.v30291960, pistato.v30291980
Apiaceae	Apium graveolens	2	Ag3G01526, Ag4G02803
Asparagaceae	Asparagus officinalis	2	AsparagusV1_07.3893.V1.1, AsparagusV1_07.3895.V1.1
Asteraceae	Flaveria trinervia	11	Ftri12G23813, Ftri17G09358, Ftri18G00605, Ftri18G05197 ... Ftri18G32080, Ftri6G07171, Ftri6G18750, Ftri6G21225, Ftri6G23284, Ftri6G24066, Ftri7G33132
Casuarinaceae	Casuarina equisetifolia	6	Ceq05G0811, Ceq09G0178, Ceq09G0183, Ceq09G0184, Ceq09G0186 ... Ceq09G0189
Casuarinaceae	Casuarina glauca	13	Cgl05G0820, Cgl05G2554, Cgl09G0211, Cgl09G0212, Cgl09G0213 ... Cgl09G0215, Cgl09G0216, Cgl09G0220, Cgl09G0225, Cgl09G0227, Cgl09G0230, Cgl09G0233, Cgl09G0235
Nitrariaceae	Nitraria sibirica	13	evm.TU.LG01.2550, evm.TU.LG01.2551, evm.TU.LG01.2552 ... evm.TU.LG01.2553, evm.TU.LG02.103, evm.TU.LG02.49, evm.TU.LG02.85, evm.TU.LG03.1509, evm.TU.LG03.1872, evm.TU.LG03.1873, evm.TU.LG05.687, evm.TU.LG08.1215, evm.TU.LG12.1254
Posidoniaceae	Posidonia oceanica	1	gene.Posoc07g02360
Rhizophoraceae	Bruguiera sexangula	22	evm.TU.28699.1, evm.TU.30321.1, evm.TU.31099.1 ... evm.TU.31149.1, evm.TU.31648.1, evm.TU.31653.1, evm.TU.36631.1, evm.TU.38418.1, evm.TU.40111.1, evm.TU.41066.1, evm.TU.42104.1, evm.TU.43046.1, evm.TU.43079.2, evm.TU.44769.1, evm.TU.45856.1, evm.TU.45856.2, evm.TU.45912.1, evm.TU.46115.1, evm.TU.Scaffold_1_RagTag.327, evm.TU.Scaffold_2_RagTag.2004, evm.TU.Scaffold_5_RagTag.1237, evm.TU.Scaffold_5_RagTag.73
Rhizophoraceae	Carallia pectinifolia	31	nbisL1-mrna-10468, nbisL1-mrna-10837, nbisL1-mrna-11708 ... nbisL1-mrna-26759, nbisL1-mrna-29537, nbisL1-mrna-29902, nbisL1-mrna-3289, nbisL1-mrna-3410, nbisL1-mrna-3412, nbisL1-mrna-3415, nbisL1-mrna-3417, nbisL1-mrna-3419, nbisL1-mrna-3421, nbisL1-mrna-3424, nbisL1-mrna-3425, nbisL1-mrna-3427, nbisL1-mrna-7279, nbisL1-mrna-7449, nbisL1-mrna-7453, nbisL1-mrna-7454, nbisL1-mrna-7610, nbisL1-mrna-7706, nbisL1-mrna-7894, nbisL1-mrna-7960, nbisL1-mrna-7962, nbisL1-mrna-7965, nbisL1-mrna-7966, nbisL1-mrna-7978, nbisL1-mrna-7980, nbisL1-mrna-7981, nbisL1-mrna-8158
Rhizophoraceae	Ceriops tagal	13	nbisL1-mrna-10210, nbisL1-mrna-11727, nbisL1-mrna-11944 ... nbisL1-mrna-11948, nbisL1-mrna-123, nbisL1-mrna-16379, nbisL1-mrna-18510, nbisL1-mrna-19, nbisL1-mrna-20, nbisL1-mrna-2695, nbisL1-mrna-434, nbisL1-mrna-7102, nbisL1-mrna-9979
Rhizophoraceae	Ceriops zippeliana	24	nbisL1-mrna-11213, nbisL1-mrna-11214, nbisL1-mrna-13730 ... nbisL1-mrna-13732, nbisL1-mrna-13733, nbisL1-mrna-20986, nbisL1-mrna-20987, nbisL1-mrna-20988, nbisL1-mrna-20989, nbisL1-mrna-20990, nbisL1-mrna-20995, nbisL1-mrna-20996, nbisL1-mrna-5299, nbisL1-mrna-5300, nbisL1-mrna-5301, nbisL1-mrna-5303, nbisL1-mrna-5304, nbisL1-mrna-5305, nbisL1-mrna-5306, nbisL1-mrna-5307, nbisL1-mrna-5308, nbisL1-mrna-5309, nbisL1-mrna-5310, nbisL1-mrna-5311
Rhizophoraceae	Kandelia candel	9	evm.TU.utg000001l.230, evm.TU.utg000006l.722 ... evm.TU.utg000009l.89, evm.TU.utg000009l.90, evm.TU.utg000009l.91, evm.TU.utg000012l.168, evm.TU.utg000012l.169, evm.TU.utg000012l.170, evm.TU.utg000015l.188
Rhizophoraceae	Kandelia obovata	6	Maker00002590, Maker00006073, Maker00011042, Maker00011322 ... Maker00013616, Maker00015861
Rhizophoraceae	Rhizophora apiculata	9	nbisL1-mrna-12946, nbisL1-mrna-18792, nbisL1-mrna-22138 ... nbisL1-mrna-22139, nbisL1-mrna-22140, nbisL1-mrna-5116, nbisL1-mrna-5117, nbisL1-mrna-7790, nbisL1-mrna-7791
Rhizophoraceae	Rhizophora mangle	14	nbisL1-mrna-16204, nbisL1-mrna-22122, nbisL1-mrna-22123 ... nbisL1-mrna-22124, nbisL1-mrna-223, nbisL1-mrna-224, nbisL1-mrna-24427, nbisL1-mrna-24428, nbisL1-mrna-24430, nbisL1-mrna-24431, nbisL1-mrna-24434, nbisL1-mrna-24435, nbisL1-mrna-24801, nbisL1-mrna-24803
Salicaceae	Populus euphratica	10	populus_peu10846, populus_peu13472, populus_peu13641 ... populus_peu13642, populus_peu13643, populus_peu15687, populus_peu15688, populus_peu15796, populus_peu15797, populus_peu15798
Solanaceae	Lycium barbarum	3	gene-LOC132599967, gene-LOC132607169, gene-LOC132620015
Solanaceae	Solanum chilense	6	SOLCI000801900, SOLCI000950300, SOLCI001650300 ... SOLCI001771000, SOLCI004275500, SOLCI005115200
Solanaceae	Solanum pennellii	1	gene-LOC107005692
Tamaricaceae	Reaumuria soongarica	2	STRG.11664_chr02_+, STRG.15799_chr06_-
Tamaricaceae	Tamarix chinensis	2	TC10G1583, TC10G1613
Zosteraceae	Zostera marina	1	Zosma06g13640.v3.1