Basic Information
Locus ID:
TC10G1441
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 39427012 | 39430657 | - | TC10G1441 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 35,681.67 Da | 41.36 | 70.72 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 43 | 326 | 1.0E-81 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 213 | 316 | 5.4E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 211 | 329 | 3.1E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 215 | 317 | 24.282423 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 143 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_034700325.1 | auxin-responsive protein IAA27 [Vitis riparia] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | F6HH09 | Auxin-responsive protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g03540 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology