Basic Information
Locus ID:
TC10G1422
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 38871031 | 38874325 | - | TC10G1422 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 94,784.26 Da | 45.84 | 72.74 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 541 | 767 | 3.5E-74 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 354 | 500 | 2.6E-55 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 196 | 255 | 2.1E-16 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 559 | 733 | 7.8E-195 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 352 | 770 | 7.8E-195 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 413 | 447 | 9.503505 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 142 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 809 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 204 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_052200335.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Diospyros lotus] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RZA4 | ribonuclease P OS=Spinacia oleracea OX=3562 GN=SOVF_011940 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology