Basic Information
Locus ID:
TC10G1323
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
EBF1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 35927634 | 35930032 | - | TC10G1323 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 70,533.43 Da | 38.10 | 104.85 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 571 | 593 | 0.0061 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 548 | 568 | 1.8 | IPR001611 |
| Pfam | PF00646 | F-box domain | 84 | 122 | 2.1E-7 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 227 | 250 | 0.86 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 188 | 428 | 2.94E-34 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 77 | 118 | 1.7E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 307 | 654 | 2.35E-28 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 66 | 126 | 8.5E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 269 | 461 | 2.7E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 268 | 6.4E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 462 | 655 | 1.1E-28 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 279 | 304 | 1.5E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 438 | 463 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 571 | 595 | 1.6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 491 | 516 | 0.031 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 253 | 278 | 0.33 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 227 | 252 | 2.0E-5 | IPR006553 |
| SMART | SM00256 | fbox_2 | 85 | 125 | 7.8E-5 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 359 | 384 | 0.049 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 545 | 570 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 385 | 410 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 201 | 226 | 8.7 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_050271939.1 | EIN3-binding F-box protein 1-like [Quercus robur] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7AR22 | Putative EIN3-binding F-box protein 1-like OS=Davidia involucrata OX=16924 GN=Din_027301 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology